Plot the total ion current.

Source: R/visualization.R

Plot the total ion current.

plot_tic(ms_data, time_scale = c("min", "s"), filter_ms1 = TRUE)

Arguments

ms_data

Mass spectrometry data stored in an mzR object as returned by mzR::openMSfile().
time_scale

Units used for the x-axis.
filter_ms1

If true, only scans from MS level 1 are taken into account.

Value

A ggplot object describing the created plot.

Examples

ms_data <- mzR::openMSfile(
  system.file("extdata", "mzml", "mab1.mzML", package = "fragquaxi")
)

plot_tic(ms_data)


plot_tic(ms_data, time_scale = "s")